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scientific-agent-skills/docs/images
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Timothy Kassis 204eef574c Add waypoint skill
2026-08-17 16:40:28 -07:00
..
adaptyv.png
Add skill images
2026-07-27 16:35:34 -07:00
aeon.png
More diagrams for skills
2026-07-27 16:40:44 -07:00
analytical-method-validation.png
More diagrams for skills
2026-07-27 16:40:44 -07:00
anndata.png
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2026-07-27 16:35:34 -07:00
arbor.png
More diagrams for skills
2026-07-27 16:40:44 -07:00
arboreto.png
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2026-07-27 16:35:34 -07:00
astropy.png
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2026-07-27 16:35:34 -07:00
autoskill.png
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2026-07-27 16:35:34 -07:00
benchling-integration.png
More diagrams for skills
2026-07-27 16:40:44 -07:00
bgpt-paper-search.png
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2026-07-27 16:35:34 -07:00
bids.png
More diagrams for skills
2026-07-27 16:40:44 -07:00
biopython.png
More diagrams for skills
2026-07-27 16:40:44 -07:00
bioservices.png
More diagrams for skills
2026-07-27 16:40:44 -07:00
bulk-rnaseq.png
Add bulk RNA-seq diagram to documentation
2026-07-27 16:41:05 -07:00
cellxgene-census.png
Add new skill for genomic data analysis
2026-07-27 16:54:06 -07:00
cirq.png
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2026-07-27 16:35:34 -07:00
citation-management.png
citation-management: correct documented commands, bump to 2.0
2026-07-31 10:59:16 -07:00
clinical-decision-support.png
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2026-07-27 16:35:34 -07:00
clinical-reports.png
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2026-07-27 16:35:34 -07:00
cobrapy.png
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2026-07-27 16:35:34 -07:00
consciousness-council.png
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2026-07-27 16:35:34 -07:00
dask.png
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2026-07-27 16:35:34 -07:00
database-lookup.png
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2026-07-27 16:35:34 -07:00
datamol.png
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2026-07-27 16:35:34 -07:00
deepchem.png
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2026-07-27 16:35:34 -07:00
deepspot-m.png
deepspot-m: document the ~19k-gene panel limit, drop redundant eval calls, add diagram
2026-08-07 13:09:04 -07:00
deeptools.png
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2026-07-27 16:35:34 -07:00
depmap.png
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2026-07-27 16:35:34 -07:00
dhdna-profiler.png
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2026-07-27 16:35:34 -07:00
diffdock.png
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2026-07-27 16:35:34 -07:00
dnanexus-integration.png
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2026-07-27 16:35:34 -07:00
docx.png
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2026-07-27 16:35:34 -07:00
esm.png
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2026-07-27 16:35:34 -07:00
etetoolkit.png
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2026-07-27 16:35:34 -07:00
exa-search.png
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2026-07-27 16:35:34 -07:00
experimental-design.png
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2026-07-27 16:35:34 -07:00
exploratory-data-analysis.png
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2026-07-27 16:35:34 -07:00
flowio.png
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2026-07-27 16:35:34 -07:00
fluidsim.png
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2026-07-27 16:35:34 -07:00
generate-image.png
Update generate-image.png to reflect recent changes in image generation process.
2026-07-31 10:43:31 -07:00
geniml.png
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2026-07-27 16:35:34 -07:00
genomic-coordinates.png
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2026-07-27 16:35:34 -07:00
genomic-intelligence.png
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2026-07-27 16:35:34 -07:00
geomaster.png
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2026-07-27 16:35:34 -07:00
geopandas.png
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2026-07-27 16:35:34 -07:00
get-available-resources.png
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2026-07-27 16:35:34 -07:00
gget.png
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2026-07-27 16:35:34 -07:00
ginkgo-cloud-lab.png
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2026-07-27 16:35:34 -07:00
glycoengineering.png
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2026-07-27 16:35:34 -07:00
gtars.png
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2026-07-27 16:35:34 -07:00
histolab.png
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2026-07-27 16:35:34 -07:00
hugging-science.png
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2026-07-27 16:35:34 -07:00
hypogenic.png
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2026-07-27 16:35:34 -07:00
hypothesis-generation.png
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2026-07-27 16:35:34 -07:00
imaging-data-commons.png
Update skill versions and enhance security measures across multiple skills. Added a triage report to SECURITY.md, improved endpoint validation in autoskill, and updated various skills to version 1.1 or 1.2. Enhanced documentation for imaging-data-commons and other skills to clarify installation and usage instructions.
2026-07-28 10:50:49 -07:00
infographics.png
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2026-07-27 16:35:34 -07:00
iso-standards-readiness.png
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2026-07-27 16:35:34 -07:00
lab-hardware-cad.png
Add CAD skill for lab hardware
2026-08-14 12:20:47 -07:00
labarchive-integration.png
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2026-07-27 16:35:34 -07:00
lamindb.png
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2026-07-27 16:35:34 -07:00
latchbio-integration.png
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2026-07-27 16:35:34 -07:00
latex-posters.png
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2026-07-27 16:35:34 -07:00
liteparse.png
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2026-07-27 16:35:34 -07:00
literature-review.png
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2026-07-27 16:35:34 -07:00
markdown-mermaid-writing.png
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2026-07-27 16:35:34 -07:00
market-research-reports.png
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2026-07-27 16:35:34 -07:00
markitdown.png
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2026-07-27 16:35:34 -07:00
matchms.png
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2026-07-27 16:35:34 -07:00
matlab.png
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2026-07-27 16:35:34 -07:00
matplotlib.png
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2026-07-27 16:35:34 -07:00
medchem.png
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2026-07-27 16:35:34 -07:00
modal.png
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2026-07-27 16:35:34 -07:00
molecular-dynamics.png
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2026-07-27 16:35:34 -07:00
molfeat.png
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2026-07-27 16:35:34 -07:00
networkx.png
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2026-07-27 16:35:34 -07:00
neurokit2.png
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2026-07-27 16:35:34 -07:00
neuropixels-analysis.png
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2026-07-27 16:35:34 -07:00
nextflow.png
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2026-07-27 16:35:34 -07:00
omero-integration.png
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2026-07-27 16:35:34 -07:00
onekgpd.png
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2026-07-27 16:35:34 -07:00
ontology-term-resolution.png
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2026-07-27 16:35:34 -07:00
open-notebook.png
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2026-07-27 16:35:34 -07:00
openpiv.png
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2026-07-27 16:35:34 -07:00
opentrons-integration.png
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2026-07-27 16:35:34 -07:00
optimize-for-gpu.png
Update optimize-for-gpu skill documentation and assets
2026-08-07 13:35:13 -07:00
pacsomatic.png
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2026-07-27 16:35:34 -07:00
paper-lookup.png
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2026-07-27 16:35:34 -07:00
paperclip.png
Test every script-bearing skill, and enforce that it stays that way
2026-07-28 10:20:12 -07:00
paperzilla.png
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2026-07-27 16:35:34 -07:00
parallel-web.png
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2026-07-27 16:35:34 -07:00
pathml.png
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2026-07-27 16:35:34 -07:00
pathogen-variant-surveillance.png
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2026-07-27 16:35:34 -07:00
pathway-enrichment.png
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2026-07-27 16:35:34 -07:00
pdf.png
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2026-07-27 16:35:34 -07:00
peer-review.png
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2026-07-27 16:35:34 -07:00
pennylane.png
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2026-07-27 16:35:34 -07:00
phylogenetics.png
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2026-07-27 16:35:34 -07:00
pi-agent.png
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2026-07-27 16:35:34 -07:00
pkpd-modeling.png
Test every script-bearing skill, and enforce that it stays that way
2026-07-28 10:20:12 -07:00
polars-bio.png
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2026-07-27 16:35:34 -07:00
polars.png
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2026-07-27 16:35:34 -07:00
pptx-posters.png
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2026-07-27 16:35:34 -07:00
pptx.png
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2026-07-27 16:35:34 -07:00
primekg.png
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2026-07-27 16:35:34 -07:00
protocolsio-integration.png
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2026-07-27 16:35:34 -07:00
pufferlib.png
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2026-07-27 16:35:34 -07:00
pydeseq2.png
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2026-07-27 16:35:34 -07:00
pydicom.png
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2026-07-27 16:35:34 -07:00
pyhealth.png
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2026-07-27 16:35:34 -07:00
pylabrobot.png
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2026-07-27 16:35:34 -07:00
pymatgen.png
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2026-07-27 16:35:34 -07:00
pymc.png
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2026-07-27 16:35:34 -07:00
pymoo.png
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2026-07-27 16:35:34 -07:00
pyopenms.png
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2026-07-27 16:35:34 -07:00
pysam.png
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2026-07-27 16:35:34 -07:00
pytdc.png
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2026-07-27 16:35:34 -07:00
pytorch-lightning.png
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2026-07-27 16:35:34 -07:00
pyzotero.png
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2026-07-27 16:35:34 -07:00
qiskit.png
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2026-07-27 16:35:34 -07:00
qutip.png
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2026-07-27 16:35:34 -07:00
rdkit.png
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2026-07-27 16:35:34 -07:00
relsa-severity-assessment.png
Introduced a new skill for relsa-severity-assessment
2026-08-07 12:08:05 -07:00
research-grants.png
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2026-07-27 16:35:34 -07:00
research-lookup.png
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2026-07-27 16:35:34 -07:00
rowan.png
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2026-07-27 16:35:34 -07:00
scanpy.png
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2026-07-27 16:35:34 -07:00
scholar-evaluation.png
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2026-07-27 16:35:34 -07:00
scientific-brainstorming.png
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2026-07-27 16:35:34 -07:00
scientific-critical-thinking.png
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2026-07-27 16:35:34 -07:00
scientific-schematics.png
Update image generation and citation management scripts to use 'uv pip install' for package installations. Modify skill versions for infographics and generate-image to reflect recent changes. Enhance error handling and review logic in infographic generation scripts, ensuring better feedback on quality assessments.
2026-07-31 10:26:56 -07:00
scientific-slides.png
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2026-07-27 16:35:34 -07:00
scientific-visualization.png
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2026-07-27 16:35:34 -07:00
scientific-writing.png
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2026-07-27 16:35:34 -07:00
scikit-bio.png
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2026-07-27 16:35:34 -07:00
scikit-learn.png
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2026-07-27 16:35:34 -07:00
scikit-survival.png
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2026-07-27 16:35:34 -07:00
scvelo.png
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2026-07-27 16:35:34 -07:00
scvi-tools.png
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2026-07-27 16:35:34 -07:00
seaborn.png
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2026-07-27 16:35:34 -07:00
shap.png
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2026-07-27 16:35:34 -07:00
simpy.png
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2026-07-27 16:35:34 -07:00
stable-baselines3.png
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2026-07-27 16:35:34 -07:00
statistical-analysis.png
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2026-07-27 16:35:34 -07:00
statistical-power.png
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2026-07-27 16:35:34 -07:00
statsmodels.png
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2026-07-27 16:35:34 -07:00
sympy.png
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2026-07-27 16:35:34 -07:00
tamarind.png
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2026-07-27 16:35:34 -07:00
tiledbvcf.png
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2026-07-27 16:35:34 -07:00
timesfm-forecasting.png
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2026-07-27 16:35:34 -07:00
torch-geometric.png
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2026-07-27 16:35:34 -07:00
torchdrug.png
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2026-07-27 16:35:34 -07:00
transformers.png
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2026-07-27 16:35:34 -07:00
treatment-plans.png
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2026-07-27 16:35:34 -07:00
umap-learn.png
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2026-07-27 16:35:34 -07:00
uncertainty-and-units.png
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2026-07-27 16:35:34 -07:00
usfiscaldata.png
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2026-07-27 16:35:34 -07:00
vaex.png
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2026-07-27 16:35:34 -07:00
venue-templates.png
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2026-07-27 16:35:34 -07:00
waypoint-bio.png
Add waypoint skill
2026-08-17 16:40:28 -07:00
what-if-oracle.png
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2026-07-27 16:35:34 -07:00
xlsx.png
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2026-07-27 16:35:34 -07:00
zarr-python.png
Add zarr image
2026-07-27 16:37:07 -07:00