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scientific-agent-skills/docs/images/deepspot-m.png
Timothy Kassis 947764127b deepspot-m: document the ~19k-gene panel limit, drop redundant eval calls, add diagram
- State that predict_genes only accepts symbols in the released tokens.csv
  panel (model.gene_names) and raises KeyError otherwise; temper the
  transcriptome-coverage claims to match.
- Use from_pretrained's device argument; the model already returns in eval
  mode and predict_genes runs under no_grad, so drop the redundant
  model.eval()/no_grad lines (also clears MDBLOCK_PYTHON_EVAL_EXEC scan FPs).
- Rebuild the tile batch inside the multi-source loop, matching the advice
  beneath the example.
- Pin the install to deepspotm==1.0.0.
- Add the required docs/images/deepspot-m.png workflow diagram.
2026-08-07 13:09:04 -07:00

1.4 MiB
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/github/scientific-agent-skills/raw/branch/main/docs/images/deepspot-m.png